PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550777.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 201aa    MW: 22489.7 Da    PI: 9.5903
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.91.4e-061071461155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rR +r+ +++  L++l+ +      +K + a++L++A+ YIk  q
  XP_023550777.1 107 RRSQRLSDKITALQKLVSPY-----GKTDTASVLQEACLYIKFVQ 146
                     7999**************99.....9****************877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MDVPSQVVNN YGFCLESKLF NNDGQLKGEG FTIPCQHPLT YQPGCNASKS MTENVSPQSV  60
LFTKKISFLQ NESHAKKREF FAQKGVQAAP YDLAGDNKRM KLQEPARRSQ RLSDKITALQ  120
KLVSPYGKTD TASVLQEACL YIKFVQEHIQ NLLQMQSSSY KNLNPQGTQQ KQGNLRSEGL  180
CVVPVTFTQK IALNKDINLV S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.13e-21bHLH family protein