PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023550653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 30958 Da PI: 6.8488 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.4 | 2.1e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ + G +W+++++ g+ R++k+c++rw +yl XP_023550653.1 14 KGPWTAEEDQKLISFILNNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.8e-16 | 71 | 111 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E++ +d++ qlG++ W++Ia++++ gRt++++k++w+++ XP_023550653.1 71 SEYEEKMVIDLHSQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111 6779**************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MGRQPCCDKV GLKKGPWTAE EDQKLISFIL NNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SEYEEKMVID LHSQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMA 120 IDPQTHKPIS LIDDTHLSQK DQNRRKSQRK QTPPQPSPPK ELKNEVASDE TNIMNLIIDG 180 FCTEEVPLIE PHEILIPSAS CSSTATTSYS SSSTSTSSLC SNSESAANLL QDLANEFPEF 240 EWPNIFENGI VEELLQDDFG STWDFVANNY GFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16600.1 | 2e-96 | MYB family protein |