PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550638.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 149aa    MW: 16440.2 Da    PI: 7.5995
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000265678123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C++C + F +   L  H++ H
  XP_023550638.1 56 YECQYCYREFANTQALGGHQNAH 78
                    99*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MAALEEHYQS KQTNNPTTRL KLFGFDVQED LEDDSTPTPS ASSDSGAAPS SGDRKYECQY  60
CYREFANTQA LGGHQNAHKK ERQQHKRAQL QASRNATVFR NPIVSAFAPP PHLLPSAVLT  120
SSSSWPPVYM PQAPPQFQVS HGCVFTPPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.12e-14C2H2 family protein