PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550485.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family BES1
Protein Properties Length: 326aa    MW: 34840.7 Da    PI: 8.5844
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822206.86e-6421451150
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptw+ErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw ve+DGttyrkg+kp e+++++g sasas  +s q
  XP_023550485.1   2 TSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWSVEPDGTTYRKGCKPIERMDVVGGSASASLYASHQ 96 
                     5899*****************************************************************************************88 PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                             +sp++s ++sp sssfpsp+s++ + +++a  +sl+p+l++ls++sss+
  XP_023550485.1  97 --------PSPCASFNPSPGSSSFPSPASSSYVANMNAdgNSLIPWLKNLSSSSSSA 145
                     ........*******************9999888777677**********9977764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MTSGTRLPTW RERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WSVEPDGTTY RKGCKPIERM DVVGGSASAS LYASHQPSPC ASFNPSPGSS SFPSPASSSY  120
VANMNADGNS LIPWLKNLSS SSSSASSSKL PNHYIHGGSI SAPVTPPLSS PTARTPRLRA  180
DWEDQSVLPG WSTHYNSSLP SSTPPSPGRQ IVPNPEWFAG LRIPQGGPNS PTFSLVSTNP  240
FGFKEAAMNG GGGSRMWTPG QSGTCSPAIA AGSDHTADIP MSEVISDEFA FGSNAAGIVK  300
AWEGERIHEE CGSDDLELTL GNSRTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-121BES1 family protein