PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023550240.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 482aa MW: 52649.9 Da PI: 5.242 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.7 | 2.4e-09 | 299 | 347 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_023550240.1 299 NSHSLAERVRREKISERMRLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 347 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 482 aa Download sequence |
MNGKDEFEDE SRRSDPMSIT SGWQFAAAVS NEDLSVSSCP STSMSNLFTP ALMNSGFCSS 60 FNEQNSIVTG EGLNSLRSNG VDWNQQNPWM KGGFPGNVHG FPANLSQLPA DSAFIERAAR 120 FSCFNSGVFG ASLPVGAFDI SNSIGIHSRQ EVMSRNVASK DGSLPMELEA KEKSPSKNET 180 ECEMSQARGK ESDEAGFSGG HGERCVLEGT ITEPSTDELC SRKRKRDEQN IELGQVKEAP 240 QQINQTAKNG ASNQQKGTQN PSSTTNKPAE KQGKQDSQPS DAPKEEYIHV RARRGQATNS 300 HSLAERVRRE KISERMRLLQ DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLATV 360 NPRLDFNIEE LLTKEIIQSK AGPSLFSFPP DMPMPYLPQH PSHLGLIPPC LPNMASSPDL 420 LRRTINSQLT SLVGGFKEPV QLLQIPNGWE NELHNAVPMS FDVAAPTSGQ DVDGTICSSL 480 PM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.3 | 1e-84 | bHLH family protein |