PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023550063.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 378aa MW: 41833.9 Da PI: 7.3589

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023550063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.8e-32	205	260	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+ +vkSHLQkYRl+ XP_023550063.1 205 KQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNGEVKSHLQKYRLH 260 79****************************************************97 PP
2	Myb_DNA-binding	42.3	1.7e-13	207	258	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ XP_023550063.1 207 RRCWSPELHRRFLHALQQLGGShvaTPKQIRELMKvDGLTNGEVKSHLQKYR 258 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MVYSYKMQEI ASTMGFTLSD FADTLEQERS KVLMFQRELP LCLQIVSHAI DCCRQHLSES 60 TTENRQSECS DQTSSDMGLV LEEFIPINGV FDSERPRHLH EAQTENNKMN DSDLNNLNLP 120 PSDWLRSAQL WNQTSDPPPL SQDTPENTTV VEVNRNGGAF QPFQKEKTGS GGGMMSSSSD 180 PVPAAETGLG GSSRREEKEA QNQRKQRRCW SPELHRRFLH ALQQLGGSHV ATPKQIRELM 240 KVDGLTNGEV KSHLQKYRLH TKCPTPTIHN NETVQPPQFL VVGGIWVPAS DYATTSSREA 300 ISAATTNGIY APMVAAAAPQ PLPSTVQKPK PRPMIPSSSA AAAITQYSSK AQAQAHDSFL 360 LRRRSHYPVQ FKSPSPGP

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MVYSYKMQEI ASTMGFTLSD FADTLEQERS KVLMFQRELP LCLQIVSHAI DCCRQHLSES  60
TTENRQSECS DQTSSDMGLV LEEFIPINGV FDSERPRHLH EAQTENNKMN DSDLNNLNLP  120
PSDWLRSAQL WNQTSDPPPL SQDTPENTTV VEVNRNGGAF QPFQKEKTGS GGGMMSSSSD  180
PVPAAETGLG GSSRREEKEA QNQRKQRRCW SPELHRRFLH ALQQLGGSHV ATPKQIRELM  240
KVDGLTNGEV KSHLQKYRLH TKCPTPTIHN NETVQPPQFL VVGGIWVPAS DYATTSSREA  300
ISAATTNGIY APMVAAAAPQ PLPSTVQKPK PRPMIPSSSA AAAITQYSSK AQAQAHDSFL  360
LRRRSHYPVQ FKSPSPGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	2e-86	G2-like family protein