PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549520.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family TCP
Protein Properties Length: 254aa    MW: 25888.9 Da    PI: 9.6787
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP121.69.1e-3827103279
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesss 79 
                     a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++  +    s
  XP_023549520.1  27 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFStiS---AS 103
                     78**************************************************************99999777331...22 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MSGSDGVNCN NGAIIDLSQT NNNGGLAVKK PPSKDRHSKV DGRGRRIRMP IICAARVFQL  60
TRELGHKSDG QTIEWLLRQA EPSIIAATGT GTTPASFSTI SASLRGGSAA AASSLDHKPL  120
LAPAPFILGK RVRTDDDGDN KDDGSGGGGG GGGVSVGSTV SSFMGTAAAG GYWAIPTRPD  180
FGQVWSFAAA AAAAPEMVIQ PTAVSHPASL FVQQQSMGEA SAAKVGNYLP GHLNLLASLS  240
GGPGSSGRRD NDHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.17e-58TCP family protein