PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549380.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 405aa MW: 45392.6 Da PI: 7.4024

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00031	300	334	16	55
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 i +++ +L++++ + +K + a++L +++ YIk Lq XP_023549380.1 300 IGDRITTLQQIVSPF-----GKTDTASVLNETIGYIKFLQ 334 778999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MADDCTDTSV ATSSTPPNWW DTHSHHHHYN SNSSCDDDVS ISTSSFTNAS NHSALTLDCS 60 SAQLLPHHAS DHHLWTQVLL NIGNGVEDIQ PNFLEPIACS DYLKKMDTNT NWDDTFQTFN 120 NNNGLLTTLE NERLLKLSNL VNTWSIALPS PDAHLRHLMD QEPHPLRPTT LLDPDAALDP 180 CASAFFRRSL HTPMPAKPFY DNHTATTRNY GDYISFNPRF AKPLLGVNPS IKSFNLSPQT 240 KKQIQQISSP TRGSGRGSGV LNEGKKKRSE ESSETVTKKA KQDNSTTPAS TKIQQPKVKI 300 GDRITTLQQI VSPFGKTDTA SVLNETIGYI KFLQEQVQLL TNPYLKTNSY KDAWQSLERK 360 ESKGEGKMEL RSRGLCLVPI SCTPQVYREN SGSDYWTPYR GCFYR

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MADDCTDTSV ATSSTPPNWW DTHSHHHHYN SNSSCDDDVS ISTSSFTNAS NHSALTLDCS  60
SAQLLPHHAS DHHLWTQVLL NIGNGVEDIQ PNFLEPIACS DYLKKMDTNT NWDDTFQTFN  120
NNNGLLTTLE NERLLKLSNL VNTWSIALPS PDAHLRHLMD QEPHPLRPTT LLDPDAALDP  180
CASAFFRRSL HTPMPAKPFY DNHTATTRNY GDYISFNPRF AKPLLGVNPS IKSFNLSPQT  240
KKQIQQISSP TRGSGRGSGV LNEGKKKRSE ESSETVTKKA KQDNSTTPAS TKIQQPKVKI  300
GDRITTLQQI VSPFGKTDTA SVLNETIGYI KFLQEQVQLL TNPYLKTNSY KDAWQSLERK  360
ESKGEGKMEL RSRGLCLVPI SCTPQVYREN SGSDYWTPYR GCFYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	4e-43	bHLH family protein