PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549004.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 282aa    MW: 31761.8 Da    PI: 6.726
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.21.7e-2893153259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK++ gs+fpr+Y+rC+++   gC+++k+v++s++dp++ e+tY+g+H+++
  XP_023549004.1  93 HDGFSWRKYGQKDILGSKFPRGYFRCSHRftlGCKATKQVQKSDNDPTIYEVTYKGTHTCN 153
                     7***************************9999***************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MELMALIQQL NQGKHLANQL RTHLHPSSSS HAIHLIDQIL RSYDNALVSL APAAALKSTP  60
VPTKKRKVMP KWSEQVKVAS ASASASAVEG PLHDGFSWRK YGQKDILGSK FPRGYFRCSH  120
RFTLGCKATK QVQKSDNDPT IYEVTYKGTH TCNRPLHSKT QQQQLQKPSL PYPMPPKQEQ  180
RPHDDEPSCQ SFSPEVAAIH VKSETFDDID IDNGFSRPLR PPSLLFESEV QDDDQSPFRE  240
NEWFGLCCDF ETGVVSIPNS VTNICIGELE EYCSFDNLEL FC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.15e-38WRKY family protein