PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023548992.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 91aa    MW: 10438.9 Da    PI: 9.3652
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023548992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.7e-0818571554
                    HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    +i + +++Lr l+P+ + + +s K+s + +L+++++YI++L
  XP_023548992.1 18 QIIELISKLRHLVPEiR-HRRSDKVSASKVLQETCNYIRNL 57
                    67789**********77.89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MSTRRSRQPG ASRISDDQII ELISKLRHLV PEIRHRRSDK VSASKVLQET CNYIRNLHRE  60
VDDLSERLSQ LLSTIDADSA EAAIIRSLIM Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.11e-42bHLH family protein