PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023548794.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 254aa MW: 28371.7 Da PI: 5.7065 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.1 | 1.2e-30 | 120 | 178 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D + WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers +dp+v+++tY+ eHnh XP_023548794.1 120 SDSWGWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSFSDPDVFIVTYTAEHNHA 178 79*************************998****************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MEDWDLQAIV KGCSGRPTSM LQDPFFSFLS EEDDFSCDFS SSSSCSSHEF EGFGSSIFPV 60 FHPLIPYPNN SAAISDLLGE FKEPQKLLQK KQISATKQKQ SKKSRQNRVV KEVKADSVCS 120 DSWGWRKYGQ KPIKGSPYPR SYYRCSSSKG CSARKQVERS FSDPDVFIVT YTAEHNHAEP 180 TRRNALAGTT RKKFPAQENP SFDVVLSPNN STCVASIEEE QPMEGVGEGG VLMHIPFEFS 240 SEDLFTGLED LLFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 2e-30 | WRKY family protein |