PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023548689.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 400aa MW: 45756.1 Da PI: 5.9204

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023548689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	64.1	2.6e-20	131	183	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r++W+++LH++F ea+++L G+ k Pk il++m+ ++Ltl +v+SHLQk+++ XP_023548689.1 131 SRIVWSSKLHRKFTEALSKL-GNRKSSPKIILKMMNEPSLTLRQVASHLQKFKS 183 79****************.9****************************86 PP
2	Myb_DNA-binding	34.6	4.5e-11	134	182	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W+ ++ ++ +a +lG++ ++k I ++m+ +tl q+ s++qk++ XP_023548689.1 134 VWSSKLHRKFTEALSKLGNRksSPKIILKMMNePSLTLRQVASHLQKFK 182 6**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MSPERDMKTS GRAIAEWGYH FLEKPISMED IELVWQIVYR KIRNPRARNL GENTNQAKKS 60 HIGGMFGRVS NVAGGVEWNP IEEEEEEEEE EKEKCGDREA RLKPSATVFD YLETMNVEEK 120 TNRNDRTHKR SRIVWSSKLH RKFTEALSKL GNRKSSPKII LKMMNEPSLT LRQVASHLQK 180 FKSQVKHLNK MTESDACTSL GTNQVQELPT KCNSMTNILG QPSYSSNITG NQLRQLQVPS 240 CLNAHRLPSQ DVFNCHLRMM NQQNSCSYKS TYGGFEGPNL VDDNNRIFTD ELYKNESLSH 300 SNFQYFGGDH EDCPFLSADN HYPHAVQELE FAQNMAGCYD VDNIRSGAHS VIAGSLNQNV 360 ALKELDDLLN NTEEDPMVYC CYDGKMNSFD IDQYSEWLNA

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MSPERDMKTS GRAIAEWGYH FLEKPISMED IELVWQIVYR KIRNPRARNL GENTNQAKKS  60
HIGGMFGRVS NVAGGVEWNP IEEEEEEEEE EKEKCGDREA RLKPSATVFD YLETMNVEEK  120
TNRNDRTHKR SRIVWSSKLH RKFTEALSKL GNRKSSPKII LKMMNEPSLT LRQVASHLQK  180
FKSQVKHLNK MTESDACTSL GTNQVQELPT KCNSMTNILG QPSYSSNITG NQLRQLQVPS  240
CLNAHRLPSQ DVFNCHLRMM NQQNSCSYKS TYGGFEGPNL VDDNNRIFTD ELYKNESLSH  300
SNFQYFGGDH EDCPFLSADN HYPHAVQELE FAQNMAGCYD VDNIRSGAHS VIAGSLNQNV  360
ALKELDDLLN NTEEDPMVYC CYDGKMNSFD IDQYSEWLNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	8e-15	ARR-B family protein