PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023548680.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 437aa MW: 49848.9 Da PI: 5.6097

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023548680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	63.9	2.9e-20	168	220	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r++W+++LH++F ea+++L G+ k Pk il++m+ ++Ltl +v+SHLQk+++ XP_023548680.1 168 SRIVWSSKLHRKFTEALSKL-GNRKSSPKIILKMMNEPSLTLRQVASHLQKFKS 220 79****************.9****************************86 PP
2	Myb_DNA-binding	34.4	5.1e-11	171	219	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W+ ++ ++ +a +lG++ ++k I ++m+ +tl q+ s++qk++ XP_023548680.1 171 VWSSKLHRKFTEALSKLGNRksSPKIILKMMNePSLTLRQVASHLQKFK 219 6**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MIIEEKHEPF NLVMANATES NMNALSILNQ TGIPIILMSP ERDMKTSGRA IAEWGYHFLE 60 KPISMEDIEL VWQIVYRKIR NPRARNLGEN TNQAKKSHIG GMFGRVSNVA GGVEWNPIEE 120 EEEEEEEEKE KCGDREARLK PSATVFDYLE TMNVEEKTNR NDRTHKRSRI VWSSKLHRKF 180 TEALSKLGNR KSSPKIILKM MNEPSLTLRQ VASHLQKFKS QVKHLNKMTE SDACTSLGTN 240 QVQELPTKCN SMTNILGQPS YSSNITGNQL RQLQVPSCLN AHRLPSQDVF NCHLRMMNQQ 300 NSCSYKSTYG GFEGPNLVDD NNRIFTDELY KNESLSHSNF QYFGGDHEDC PFLSADNHYP 360 HAVQELEFAQ NMAGCYDVDN IRSGAHSVIA GSLNQNVALK ELDDLLNNTE EDPMVYCCYD 420 GKMNSFDIDQ YSEWLNA

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MIIEEKHEPF NLVMANATES NMNALSILNQ TGIPIILMSP ERDMKTSGRA IAEWGYHFLE  60
KPISMEDIEL VWQIVYRKIR NPRARNLGEN TNQAKKSHIG GMFGRVSNVA GGVEWNPIEE  120
EEEEEEEEKE KCGDREARLK PSATVFDYLE TMNVEEKTNR NDRTHKRSRI VWSSKLHRKF  180
TEALSKLGNR KSSPKIILKM MNEPSLTLRQ VASHLQKFKS QVKHLNKMTE SDACTSLGTN  240
QVQELPTKCN SMTNILGQPS YSSNITGNQL RQLQVPSCLN AHRLPSQDVF NCHLRMMNQQ  300
NSCSYKSTYG GFEGPNLVDD NNRIFTDELY KNESLSHSNF QYFGGDHEDC PFLSADNHYP  360
HAVQELEFAQ NMAGCYDVDN IRSGAHSVIA GSLNQNVALK ELDDLLNNTE EDPMVYCCYD  420
GKMNSFDIDQ YSEWLNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	4e-20	ARR-B family protein