PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023548663.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 142aa    MW: 15426.3 Da    PI: 10.2831
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023548663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.93.4e-193367135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
  XP_023548663.1 33 CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 67
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MMDPIEEGSE FKDAENSPRM SSPAESEQNK KTCADCGTTK TPLWRGGPAG PKSLCNACGI  60
RSRKKRRSLL GLNRGSEVER KSKGSSNRNS NGGGNQAKLG GDNLKWRSTA FGRKDLMQRR  120
QLGEEEQAAV LLMALSYGSV YA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.15e-29GATA family protein