PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023548566.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 312aa MW: 34946.9 Da PI: 6.0009 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.3 | 1.2e-17 | 162 | 216 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_023548566.1 162 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 216 778899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 128.1 | 3.7e-41 | 162 | 252 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk XP_023548566.1 162 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 252 69*************************************************************************************9.555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MELGLSLGDA PKPFRFVEKQ PQVTPRPRRI SRPDLGFCVD LSIGRPVAGA KEDDEEKINQ 60 RDYESDGNED PPIQLDLLPH NPVPRNLTNP YQGFPWPSSE NDEGEDRTAS PNSAASSFQM 120 EFGLYGGGGN ISCQREQMEN GVIESERASS RASDEDENGS TRKKLRLSKE QSAFLEESFK 180 EHNTLNPKQK LALAKQLNLR PRQVEVWFQN RRARTKLKQT EVDCEYLKRC CETLTEENRR 240 LQKELQELRA LKTTDSFYMQ LPATTLTMCP SCERVTSTSA GSSGGKSTEA VSKRSGFAIT 300 GRPSSSSFPF SA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 167 | TRKKLRL |
2 | 211 | 219 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 2e-73 | HD-ZIP family protein |