PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023548503.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 547aa MW: 60788.7 Da PI: 6.5105

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023548503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	86.9	2e-27	103	156	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gL++e+v+SHLQkYRl XP_023548503.1 103 KPRVVWSVELHQQFVIAVDQL-GIDKAVPKKILELMNVPGLSRENVASHLQKYRL 156 79*****************.******************************8 PP
2	Myb_DNA-binding	36.2	1.4e-11	105	155	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av qlG + +k+I + m+ g++++++ s++qky+ XP_023548503.1 105 RVVWSVELHQQFVIAVDQLGIDkaVPKKILELMNvPGLSRENVASHLQKYR 155 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MSADDGKNVV MKGVIHGACD YLIKPVRIEA LRNIWQHVVR KRKSEWKDLE QSGSMDDGDR 60 DQNVSEGANY SSSAYDGSWN SSKRKRDAEE ELEERDDTST LKKPRVVWSV ELHQQFVIAV 120 DQLGIDKAVP KKILELMNVP GLSRENVASH LQKYRLYLRR LSGVSPHPSN LNNSFMNPQD 180 HPPFGSMASS YNGIDLQTLL VTGQLSPQSL AALQATGLRR PTVKSTLPMA LVDQNNIFSF 240 ENPKLRFGED QTQHLNNTKP VSLFHGIPTK MEPKQLANMQ HPSVQTQRNM NMNMNMPLNI 300 KSEHGGTQLM HLSQQQTVGQ TLNNSTVAHH LPGIPSTLRN PIISGSVTTG NGTADNSHVP 360 RYNLVSPTSV MVNYPMSQTT EVFQEEMNSN LKVSSGVMSS YGVFSDLHMQ KSHDWDSQNV 420 STLAFGTPHH GNFIHHSFDI SPSSLIHHGF PSSQTNGENH NSSVNGKTNF SFLDSTQPGI 480 PQSVAHNSFF DPGEVKNQII PDASYQTDLL SEDFGQDELL GVFLKQEQQE DNGSVDFSGY 540 KTENICV

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MSADDGKNVV MKGVIHGACD YLIKPVRIEA LRNIWQHVVR KRKSEWKDLE QSGSMDDGDR  60
DQNVSEGANY SSSAYDGSWN SSKRKRDAEE ELEERDDTST LKKPRVVWSV ELHQQFVIAV  120
DQLGIDKAVP KKILELMNVP GLSRENVASH LQKYRLYLRR LSGVSPHPSN LNNSFMNPQD  180
HPPFGSMASS YNGIDLQTLL VTGQLSPQSL AALQATGLRR PTVKSTLPMA LVDQNNIFSF  240
ENPKLRFGED QTQHLNNTKP VSLFHGIPTK MEPKQLANMQ HPSVQTQRNM NMNMNMPLNI  300
KSEHGGTQLM HLSQQQTVGQ TLNNSTVAHH LPGIPSTLRN PIISGSVTTG NGTADNSHVP  360
RYNLVSPTSV MVNYPMSQTT EVFQEEMNSN LKVSSGVMSS YGVFSDLHMQ KSHDWDSQNV  420
STLAFGTPHH GNFIHHSFDI SPSSLIHHGF PSSQTNGENH NSSVNGKTNF SFLDSTQPGI  480
PQSVAHNSFF DPGEVKNQII PDASYQTDLL SEDFGQDELL GVFLKQEQQE DNGSVDFSGY  540
KTENICV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-101	ARR-B family protein