PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023548450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 230aa MW: 25159.1 Da PI: 7.0086 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.1 | 0.00013 | 70 | 92 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs++ L H++ H XP_023548450.1 70 FSCNFCPREFSSSQALGGHQNAH 92 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MDSPPEIKDP SDSKDISPGL VSLDPSLSNK DLGGSLMPEE LNLIDFFSAD NLPNDTSHEG 60 KEAAAKPRVF SCNFCPREFS SSQALGGHQN AHNRKRKMAQ TGHKLVTNST DCKQSSVSSL 120 PFQGFNRSLG IQMHSMIHKP FSHAPVFGSF RSFESKVWDR QPLYTQVASG IWPLSENYQS 180 GASPVLPSSS GAAGFDGGWR LSSNSDTLLD SKRPHNELHK LDCLDLSLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10970.1 | 2e-26 | C2H2 family protein |