PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023548151.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 267aa MW: 30322.5 Da PI: 10.8439 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.3 | 3e-31 | 31 | 80 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_023548151.1 31 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 80 79***********************************************8 PP | |||||||
2 | K-box | 105.3 | 7.5e-35 | 101 | 195 | 6 | 100 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 s++ea+++ ++qe+akL+++i n+q+ +RhllGe+++sLs+k+L++L+ +Lek++++iRs+Knell+++ie++ k+e el+++n+ +r+k++e XP_023548151.1 101 AGSVSEANTQFYEQESAKLRAQIGNMQNLNRHLLGESIGSLSVKDLKSLQVKLEKGITRIRSRKNELLFAEIEYMHKREIELHNTNQLIRAKIAE 195 55699***************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MGYPDEMQKQ KQAGEEQSQR RRSGRGKIEI KRIENTTNRQ VTFCKRRNGL LKKAYELSVL 60 CDAEVALIVF STRGRLYEYA NNSVRATISR YKKACSDPLS AGSVSEANTQ FYEQESAKLR 120 AQIGNMQNLN RHLLGESIGS LSVKDLKSLQ VKLEKGITRI RSRKNELLFA EIEYMHKREI 180 ELHNTNQLIR AKIAETERRQ QNRSGNNSIG ARGGGRNRST TASDWREKLQ RKKPSNFLHT 240 PFQTLNLGFF SSSIAIPASL SLSLQVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 6e-99 | MIKC_MADS family protein |