PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023547954.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 293aa MW: 32893.1 Da PI: 8.4933 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.4 | 2.8e-06 | 126 | 145 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C+k F+r nL+ H+ XP_023547954.1 126 FSCPLCSKAFNRYNNLQMHM 145 89*****************9 PP | |||||||
2 | zf-C2H2 | 14.5 | 0.0001 | 210 | 232 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k F k + ++H +++ XP_023547954.1 210 FTCRKCTKAFAVKGDWRTHEKNC 232 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MTDPNHSNSF NFIPLPSSPP SNSGFSQCRH RPPPPPPPQA LPLLNTFSAE TTDHPSSSTS 60 YEHDSPPLAL DFSLSCPSSN YSRSISPDPT GKTLDGDISD HPLPISGKGQ FWIPTPSQIL 120 IGPTQFSCPL CSKAFNRYNN LQMHMWGHGS QYRKGPESLK GTQPTAMLKL PCYCCAPGCK 180 HNIDNPRSRP LKDFRTLQTH YKRKHGIKPF TCRKCTKAFA VKGDWRTHEK NCGKIWYCFC 240 GSDFKHKRSL KDHIKAFGRG HGALGLDYFD DDNEPGSELE HEQHEPQLLF HLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-112 | C2H2 family protein |