PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547827.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 317aa    MW: 35289.2 Da    PI: 7.0567
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1056.7e-33149205158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh hA+rR+RgsgGrF
  XP_023547827.1 149 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKSRKPYLHESRHLHAMRRARGSGGRF 205
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MPSKPENVDQ QIVDGSKYLV QSTKYSEAWW HGVGNNTIAG EDATKTASAD YLNDTVSSGG  60
TQSQANDENI GKEVQHLKYI PFSTSPPVGE RLDLNSQMEL VGHSIVLTSY PFSDAQYCQM  120
LTSNGPQSTF PHIYGLHHAR MPLPLEMEEE PVYVNAKQYH GILRRRQSRA KAELEKKVIK  180
SRKPYLHESR HLHAMRRARG SGGRFLNTKK PNNVISNTDR EEGINSGTNH STKPVNEAGS  240
KYMGADENGI KDTLNEEDKE FMTQNLQITR AFFNGKLNGH GISTYTSQLA DVEGGHLDQP  300
HESMQVNGAP QRAIPIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.22e-32NF-YA family protein