PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023547804.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 914aa MW: 103403 Da PI: 7.8011

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023547804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166	6.3e-52	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwl+++ei+aiL n++ + ++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ve +++yYah+ +nptf rr XP_023547804.1 35 EaSARWLRPNEIHAILCNYKYFVIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDNPTFVRR 129 4589***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e+k XP_023547804.1 130 CYWLLDKSLEHIVLVHYRETK 150 ****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 914 aa Download sequence
MSLSMKDDVQ GSLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEIHAIL CNYKYFVIHV 60 KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG 120 LDNPTFVRRC YWLLDKSLEH IVLVHYRETK EWQSSPSTSM NSNSGSVSNP STPWLLSEEL 180 DSRATHVYSV GGNELSEPSD TTTVMAHEQR LHEINTLEWD ELLVMNEPLK PAMTKEDKLS 240 CFDQQNQVPI NVANKIFGVI TSFNNPVEST GSANSIGSVN MSLMGGQTNL NVESRESIPI 300 NSLDNLLNNG LQSQDSLGQW INEVITDSPG SVIDPAIEPS ISSVHNSYCD STLYHHQSSV 360 EQIFNITEVS PAWAFSTEKT KIVIIGYFSD EYVHLAKSNI SVVCGDTSIN ADFVQPGVYR 420 CLVEPHSPGL VHLYLSLDGH KPISQVLNFE YRAPLLQVPE VTSEQILKWE EFQVQMRLAH 480 LMFSTSKSLS IMSTKLSPTA LNEAKKLAVK TSGISDGWIY LLKSVTENKT PIPHAREGVL 540 EMILRSRLRD WLIERVAEGS KKSTEFDVNG QGVIHLCAIL GYTWAVHLFV WSGLSINFRD 600 KSGWTALHWA AYYGRERMVA ALLSVGAKPS LITDPTSKNP LGYTAADLAS MNGFNGLAAY 660 LSEKALVSHF EDMSLAGNVS GSLETSTIPD TTNFDSVSEE QMYMKETLAA YRTAADAAAR 720 IQAAFREHSL KQRTDAIELS TPEAEARGII AAMKIQHAFR NFETRKKMAA AARIQYRFRT 780 WKIRKDFLNM RRQTIRIQAA FRGFQVRRQY RKIVWSVGIV EKAILRWRLK RKGFRGLQVA 840 PAEVTEDQET GMEEDFYRVS QKQAEERVER AVIRVQAMFR SKKVQEEYRR MKLTHAEAAL 900 EYEELSHPDM KLNG

Sequence ? help Back to Top

Protein Sequence Length: 914 aa Download sequence

MSLSMKDDVQ GSLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEIHAIL CNYKYFVIHV  60
KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG  120
LDNPTFVRRC YWLLDKSLEH IVLVHYRETK EWQSSPSTSM NSNSGSVSNP STPWLLSEEL  180
DSRATHVYSV GGNELSEPSD TTTVMAHEQR LHEINTLEWD ELLVMNEPLK PAMTKEDKLS  240
CFDQQNQVPI NVANKIFGVI TSFNNPVEST GSANSIGSVN MSLMGGQTNL NVESRESIPI  300
NSLDNLLNNG LQSQDSLGQW INEVITDSPG SVIDPAIEPS ISSVHNSYCD STLYHHQSSV  360
EQIFNITEVS PAWAFSTEKT KIVIIGYFSD EYVHLAKSNI SVVCGDTSIN ADFVQPGVYR  420
CLVEPHSPGL VHLYLSLDGH KPISQVLNFE YRAPLLQVPE VTSEQILKWE EFQVQMRLAH  480
LMFSTSKSLS IMSTKLSPTA LNEAKKLAVK TSGISDGWIY LLKSVTENKT PIPHAREGVL  540
EMILRSRLRD WLIERVAEGS KKSTEFDVNG QGVIHLCAIL GYTWAVHLFV WSGLSINFRD  600
KSGWTALHWA AYYGRERMVA ALLSVGAKPS LITDPTSKNP LGYTAADLAS MNGFNGLAAY  660
LSEKALVSHF EDMSLAGNVS GSLETSTIPD TTNFDSVSEE QMYMKETLAA YRTAADAAAR  720
IQAAFREHSL KQRTDAIELS TPEAEARGII AAMKIQHAFR NFETRKKMAA AARIQYRFRT  780
WKIRKDFLNM RRQTIRIQAA FRGFQVRRQY RKIVWSVGIV EKAILRWRLK RKGFRGLQVA  840
PAEVTEDQET GMEEDFYRVS QKQAEERVER AVIRVQAMFR SKKVQEEYRR MKLTHAEAAL  900
EYEELSHPDM KLNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein