PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Previous version: v3.0 v4.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023547797.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 273aa MW: 30373.1 Da PI: 5.9825

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023547797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.1	1.8e-33	131	189	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCt+agC vkk+vers++dp+vv++tYeg+H h+ XP_023547797.1 131 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSVVVTTYEGQHIHQ 189 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MEEVKKEEEL RKGDQNLMGN SGLLFDIPLM DLLAGQDFTP SLFDLLSAAP PTTTLPPPSS 60 AVPESSEVLN TPPTPNSSVS CSSNEKVFDA DDGDLREKSP FNKQLKAKKK NQKRVREPRF 120 AFMTKSEVDH LDDGYRWRKY GQKAVKNSPY PRSYYRCTTA GCGVKKRVER SSDDPSVVVT 180 TYEGQHIHQS PIMPRGALSV AAAAAAFASP QPSLVFPQPQ YTYTPAPPVD VRFDAAFHSF 240 GEERRRIEES FQDHGLLQDM IVPSSALHIP EEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	4e-47	WRKY family protein