PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547741.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 572aa    MW: 65061.3 Da    PI: 4.7953
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547741.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS271.62.6e-832095702374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs..Pilkfs 94 
                      ++L+++Ae vs ++ e+a++lL+r +  asp+g+++qRl++yf++AL++r++r      ++   +et ++  ++e+++l+++  +   P+ ++ 
  XP_023547741.1 209 AHVLFAAAEKVSYQQYERASRLLQRCEWAASPSGNTVQRLVFYFAKALRKRINR------ETG--RETIKEPKVDEVMSLEALRGCMklPFQQVM 295
                     799***************************************************......222..222222255666666666655333****** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     hlta qaI e v+  + vH iD++i  G++W a++++L + +++ p   l+iT+v+s   ++ + +e++g+ L+++Ae+l++pf+f++++++++ 
  XP_023547741.1 296 HLTAVQAIFEHVKLISIVHLIDLEIRSGVHWSAFMKSLEDLKDELPinLLKITAVVS---DKGHLIEQVGKWLENVAESLNIPFSFKAILVSDMM 387
                     ***************************************8876666569********...578899***************************** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     +l+ e+++++++E++a+ + l l ++  +++sle+    +++++++l+P ++vv+e ea++n +sF++rf+e+l + ++ fd+l++ + ++++ r
  XP_023547741.1 388 ELKEEHFETEEHEMVAIYSPLVLRTMITKPASLEN----LMRVIRKLNPSIMVVSEIEANYNISSFVNRFIESLFFTASYFDCLKTCIEEDEDSR 478
                     ***********************************....******************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +k+E    g+ i+nvva eg++r+ r  + e Wre ++++ +++++ls++  +qak + + ++ ++  ++e+++++l+ gWk+ p++svSaWr
  XP_023547741.1 479 RKIEGL-CGEGIENVVASEGSDRVVRSVKIEVWREFFGRFRMEEMELSDSCLSQAKFVAKGFAyGKFCSLEKNQKCLIVGWKETPIISVSAWR 570
                     ****98.9*******************************************************88889************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    
MADDFFPFTP FDFNGSLAGT FFPSNGIHQN QETELRGKED DCPFGELGDF NFVSPDQSGF  60
YQQDILKIGN ETDYPQPNSD CVILNEILFG IGNDFTLSEL IQEKSKISDN LNADSISKQV  120
LSPCLETLQL LNSYGGKVKR MKGTDLEKRG GEASEENKSL STEEILRVAG ARYVHFFPEG  180
HDEFYMPMHP CDFALAGLSV DERNDVELAH VLFAAAEKVS YQQYERASRL LQRCEWAASP  240
SGNTVQRLVF YFAKALRKRI NRETGRETIK EPKVDEVMSL EALRGCMKLP FQQVMHLTAV  300
QAIFEHVKLI SIVHLIDLEI RSGVHWSAFM KSLEDLKDEL PINLLKITAV VSDKGHLIEQ  360
VGKWLENVAE SLNIPFSFKA ILVSDMMELK EEHFETEEHE MVAIYSPLVL RTMITKPASL  420
ENLMRVIRKL NPSIMVVSEI EANYNISSFV NRFIESLFFT ASYFDCLKTC IEEDEDSRRK  480
IEGLCGEGIE NVVASEGSDR VVRSVKIEVW REFFGRFRME EMELSDSCLS QAKFVAKGFA  540
YGKFCSLEKN QKCLIVGWKE TPIISVSAWR FL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.13e-47GRAS family protein