PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023547741.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 572aa MW: 65061.3 Da PI: 4.7953 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 271.6 | 2.6e-83 | 209 | 570 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs..Pilkfs 94 ++L+++Ae vs ++ e+a++lL+r + asp+g+++qRl++yf++AL++r++r ++ +et ++ ++e+++l+++ + P+ ++ XP_023547741.1 209 AHVLFAAAEKVSYQQYERASRLLQRCEWAASPSGNTVQRLVFYFAKALRKRINR------ETG--RETIKEPKVDEVMSLEALRGCMklPFQQVM 295 799***************************************************......222..222222255666666666655333****** PP GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187 hlta qaI e v+ + vH iD++i G++W a++++L + +++ p l+iT+v+s ++ + +e++g+ L+++Ae+l++pf+f++++++++ XP_023547741.1 296 HLTAVQAIFEHVKLISIVHLIDLEIRSGVHWSAFMKSLEDLKDELPinLLKITAVVS---DKGHLIEQVGKWLENVAESLNIPFSFKAILVSDMM 387 ***************************************8876666569********...578899***************************** PP GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282 +l+ e+++++++E++a+ + l l ++ +++sle+ +++++++l+P ++vv+e ea++n +sF++rf+e+l + ++ fd+l++ + ++++ r XP_023547741.1 388 ELKEEHFETEEHEMVAIYSPLVLRTMITKPASLEN----LMRVIRKLNPSIMVVSEIEANYNISSFVNRFIESLFFTASYFDCLKTCIEEDEDSR 478 ***********************************....******************************************************** PP GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 +k+E g+ i+nvva eg++r+ r + e Wre ++++ +++++ls++ +qak + + ++ ++ ++e+++++l+ gWk+ p++svSaWr XP_023547741.1 479 RKIEGL-CGEGIENVVASEGSDRVVRSVKIEVWREFFGRFRMEEMELSDSCLSQAKFVAKGFAyGKFCSLEKNQKCLIVGWKETPIISVSAWR 570 ****98.9*******************************************************88889************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 572 aa Download sequence |
MADDFFPFTP FDFNGSLAGT FFPSNGIHQN QETELRGKED DCPFGELGDF NFVSPDQSGF 60 YQQDILKIGN ETDYPQPNSD CVILNEILFG IGNDFTLSEL IQEKSKISDN LNADSISKQV 120 LSPCLETLQL LNSYGGKVKR MKGTDLEKRG GEASEENKSL STEEILRVAG ARYVHFFPEG 180 HDEFYMPMHP CDFALAGLSV DERNDVELAH VLFAAAEKVS YQQYERASRL LQRCEWAASP 240 SGNTVQRLVF YFAKALRKRI NRETGRETIK EPKVDEVMSL EALRGCMKLP FQQVMHLTAV 300 QAIFEHVKLI SIVHLIDLEI RSGVHWSAFM KSLEDLKDEL PINLLKITAV VSDKGHLIEQ 360 VGKWLENVAE SLNIPFSFKA ILVSDMMELK EEHFETEEHE MVAIYSPLVL RTMITKPASL 420 ENLMRVIRKL NPSIMVVSEI EANYNISSFV NRFIESLFFT ASYFDCLKTC IEEDEDSRRK 480 IEGLCGEGIE NVVASEGSDR VVRSVKIEVW REFFGRFRME EMELSDSCLS QAKFVAKGFA 540 YGKFCSLEKN QKCLIVGWKE TPIISVSAWR FL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03450.1 | 3e-47 | GRAS family protein |