PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023547696.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 183aa MW: 20949.4 Da PI: 7.3026 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59 | 1.2e-18 | 7 | 55 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 +y+GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a++ + XP_023547696.1 7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLMC 55 69******9.**********8.....334**********************8775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPKAR 60 TNFQFNPNDQ QSSSSSSSSS KLLSAALMAK LHKCHLASLQ IAKKHAAHKQ HPGFEPNYTV 120 YGVPPPSISQ TTTDRWRQEE TQIETNNDNN NIHHQQCLQP LEDDDIEQMI QELLDLGSFE 180 IIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 3e-52 | ERF family protein |