PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547677.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 294aa    MW: 32900.5 Da    PI: 6.9967
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.9e-17222258135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgpdg++tLCnaCGl+++ kg+
  XP_023547677.1 222 CRHCGISEksTPMMRRGPDGPRTLCNACGLMWANKGT 258
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDGIHASDGR MHMNHAQHSM HTQSVQEQEH HDFHYTSNGN TLADEHENEG HGIMVVEREA  60
PSDHGDLPEN RGVMVDRGGD NCDQLTLSYQ GQVYVFDTVS PEKVQAVLLL LGGREVPIRV  120
PSIPITNQQN DRALANIPPR LSVPQRLASL IRFREKRKER NFDKKIRYTV RKEVALRMQR  180
NKGQFTSSKP THEDSSLAIT SWESNENWAT DGNGSQQQEI LCRHCGISEK STPMMRRGPD  240
GPRTLCNACG LMWANKGTLR DLSKAPNQGG QASTFNRNEN VVQDGDSESN PKGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-121GATA family protein