PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547324.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 286aa    MW: 32619.8 Da    PI: 6.0662
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.17.7e-35141062103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F++k+y++++d+ +++li ws+ +nsf+v d+ e+++++Lp+yFkh+nf+SFvRQLn+YgFkkv+ ++         weF+ ++F +++k+ll++
  XP_023547324.1  14 FVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVRQLNTYGFKKVDPDK---------WEFASQWFLRDQKHLLKN 99 
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i r++++
  XP_023547324.1 100 ITRRRHS 106
                     ***9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MESNHQQNDT VAPFVMKTYQ MVNDPITDDL IAWSKANNSF IVADPLELSR RILPSYFKHN  60
NFSSFVRQLN TYGFKKVDPD KWEFASQWFL RDQKHLLKNI TRRRHSRNSH IQVKREDDGE  120
LALEISKLKQ EQIALETEVE SMNKRIEATE KRPQQMMSFL YKIMENPEIL QRILLQNRRV  180
RRRVTMRPPP SPVKFVKAME DDSSPETGVF DDNVALSSPE TTLWWNGGGA DSGGGFGDYI  240
ELSPPESNIS VYELGDGRDS VLAELVAGGG SSSPPPYPFS LFSGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.16e-79HSF family protein