PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023547176.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 162aa MW: 18291.7 Da PI: 10.8068 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.2 | 1.6e-17 | 18 | 63 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+++W++Ia++++ gR++k+c++rw++ XP_023547176.1 18 RGHWRPAEDTKLKELVALHGPHNWNLIAHKLQ-GRSGKSCRLRWLNQ 63 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 50.4 | 5.2e-16 | 70 | 113 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T++E+e+l +a+ +G++ W+ I+r ++ gRt++ +k++w+ XP_023547176.1 70 RTAFTEQEEERLMQAHGIYGNK-WAVISRLFP-GRTDNGVKNHWHV 113 678*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MATETDPTKH SNGSLCGRGH WRPAEDTKLK ELVALHGPHN WNLIAHKLQG RSGKSCRLRW 60 LNQLDPRINR TAFTEQEEER LMQAHGIYGN KWAVISRLFP GRTDNGVKNH WHVIMARKCR 120 QQHIASYTRR NRFSQPPPPP SSGGGLEGGE PAFIDFLGVG GR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 1e-68 | MYB family protein |