PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023547021.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 252aa MW: 26412 Da PI: 7.8192

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023547021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.4	1.5e-38	25	83	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + l+cprCds ntkfCyynny+lsqPr+fCk+CrryWt+GG+lr+vPvGgg+rkn k+s XP_023547021.1 25 DPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNSKRS 83 6789***************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MPSESANRSS RPQHSMAFPP PPQSDPLPCP RCDSLNTKFC YYNNYNLSQP RHFCKSCRRY 60 WTHGGTLRDV PVGGGSRKNS KRSRYHNINN TNTSSSASAS VSSTSVSSST SASSSSASLL 120 PAPTLNNDIN VVDVNLNDTM PAPGSFTSLL SSQASGFLAL GGYASASGSG HAPATFDDMG 180 FALGRGLWGT TTCTYPEVGD LVGSYSAAVA PETSSYNTWQ MNAGDGGNSG VVDGDLLGWP 240 DLAISMQGKS LK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66940.1	1e-31	Dof family protein