PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023546979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NF-YA | ||||||||
Protein Properties | Length: 333aa MW: 37123.5 Da PI: 8.5736 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 101.7 | 6.9e-32 | 194 | 250 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++Il+RRq+Rakle+++++ +++rkpylheSRh hAl+R RgsgGrF XP_023546979.1 194 DGPIYVNAKQYHGILRRRQSRAKLEAQNRV-IRNRKPYLHESRHLHALNRVRGSGGRF 250 57****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MNMMAIPLKN FSQKNLDQDS VHSVFPFSVD CTPWRSSNER KIPLPLSDNT TLKLETPPQH 60 HHKHLGFQLP DQESSTAHSI GESLHKVCTM EVQNAQEQCI SSESGQEENC GESVENQMKP 120 VILFSNPEFM FNSPQVDGSQ PMTRVPYPYI DPYYGGLLCS AYSQQAINNQ AQVNTNVVGI 180 APARVPIPHA LAEDGPIYVN AKQYHGILRR RQSRAKLEAQ NRVIRNRKPY LHESRHLHAL 240 NRVRGSGGRF LSSKKNQSPV QSTPSTTLSQ QMNTPDFNTC SSETSDRGVS SEITSISYGS 300 VRFGRSDSQL SALSSRMGGR MEQYSGDLMR GGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72830.1 | 2e-46 | NF-YA family protein |