PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546978.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 333aa    MW: 37123.5 Da    PI: 8.5736
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.76.9e-32194250158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RRq+Rakle+++++ +++rkpylheSRh hAl+R RgsgGrF
  XP_023546978.1 194 DGPIYVNAKQYHGILRRRQSRAKLEAQNRV-IRNRKPYLHESRHLHALNRVRGSGGRF 250
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MNMMAIPLKN FSQKNLDQDS VHSVFPFSVD CTPWRSSNER KIPLPLSDNT TLKLETPPQH  60
HHKHLGFQLP DQESSTAHSI GESLHKVCTM EVQNAQEQCI SSESGQEENC GESVENQMKP  120
VILFSNPEFM FNSPQVDGSQ PMTRVPYPYI DPYYGGLLCS AYSQQAINNQ AQVNTNVVGI  180
APARVPIPHA LAEDGPIYVN AKQYHGILRR RQSRAKLEAQ NRVIRNRKPY LHESRHLHAL  240
NRVRGSGGRF LSSKKNQSPV QSTPSTTLSQ QMNTPDFNTC SSETSDRGVS SEITSISYGS  300
VRFGRSDSQL SALSSRMGGR MEQYSGDLMR GGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-46NF-YA family protein