PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023546920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRF | ||||||||
Protein Properties | Length: 399aa MW: 45305.6 Da PI: 8.6767 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.7 | 1.1e-24 | 103 | 146 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_023546920.1 103 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 146 79***************************************987 PP | |||||||
2 | QLQ | 57 | 6e-20 | 8 | 40 | 2 | 34 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FTaaQ+q+L++Q+l++Ky++++ PvPp+Ll a XP_023546920.1 8 PFTAAQWQELEHQALIFKYMVSGIPVPPDLLYA 40 8*****************************865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence |
MSARNRLPFT AAQWQELEHQ ALIFKYMVSG IPVPPDLLYA MKRSSLDTPF ISRLFPHQYP 60 DGNTSYFSVL TRIIHYDAQV LGLYCVCAVG WNFVQMGSGR KIDPEPGRCR RTDGKKWRCS 120 KEAYPDSKYC ERHMHRGKNR SRKPVEVLKP TTTITALTSN PSTPPISSIT HNSTASLSTN 180 SFPSEIHTHS CFNTPPPPHP FLYQHGSFSR PPGSAHLQHN SNPSLLLDPP ADYRRNRYVY 240 AGKEDVDKHP FLSEEHSGNM RGFSASSMED PWQLTPLTMS CSSSSPRHKN CSALQGDYSS 300 YLQLQSFGGS PKQVKQDEHY YAVGKYNEMQ SKMDREKPEK TMHHFFGEWS PKDRESWVDL 360 DDKSSNTGAV SETRLSMSIL NSSQHDFSSI FSSNKHNEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 3e-51 | GRF family protein |