PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546889.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

BES1

Protein Properties

Length: 325aa MW: 35393.6 Da PI: 8.7382

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	209.2	1.1e-64	26	162	1	141
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 ++s+rkp+w+ErEnn+ RERrRRaiaakiyaGLRaqGn++lpk++DnneVlkALc++AGw+vedDGttyrkg++p+ +++gss++a+p +s++ XP_023546889.1 26 TTSRRKPSWRERENNRTRERRRRAIAAKIYAGLRAQGNFNLPKHCDNNEVLKALCADAGWTVEDDGTTYRKGCRPP-PIDIVGSSTRATPYTSQN 119 589***********************************************************************.************** PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasaasllpvls 141 s+ ss+++sp++sy+ sp+sssfpsps+ld ++ + +l+p+l+ XP_023546889.1 120 PSPLSSSFPSPMASYQVSPSSSSFPSPSRLDANHPS---NLIPYLR 162 *****************************99765...5666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MPFSISCGII AAANRKMTSD GATSATTSRR KPSWRERENN RTRERRRRAI AAKIYAGLRA 60 QGNFNLPKHC DNNEVLKALC ADAGWTVEDD GTTYRKGCRP PPIDIVGSST RATPYTSQNP 120 SPLSSSFPSP MASYQVSPSS SSFPSPSRLD ANHPSNLIPY LRQAIPKSLP GLRISNSAPV 180 TPPLSSPASN WEVTAKESLS LLNYPFFAVS APASPTRPQL LHTPATIHEC DESESSTNDS 240 NQWALLRACA PTSPTFNLMK PADQHALHGG FIKENGRGNE FEFLGCKVKP WEGEKIHEVG 300 LEDLELTLGS GKAQNDNNSK KPCFD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	48	RRKPSWRERENNRTRERRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.3	1e-101	BES1 family protein