PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546842.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HB-other
Protein Properties Length: 318aa    MW: 36410.2 Da    PI: 5.4395
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.74.7e-092592932155
                     HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
        Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                     k +yp+++++  LA+ +gL+ +q+ +WF N+R ++
  XP_023546842.1 259 KWPYPTEADKMALAETTGLDPKQINNWFINQRKRH 293
                     569*****************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MGENMYGMRS TPQFSPKSFL PPHTPILPLD YQTFLPSTNY FPRDRIPVFG SDELLSEPEP  60
PSITPDFPLA QDVPSVIKAQ ILSHPTYPRL LHAYIDCHKV GAPPEIACLL EEIRRENDSH  120
KQNAMSTCFG GDPELDEFME TYCDMLVKYK SDLSRPFHEA SSFLSNIELQ LSNLCAGAST  180
RSSSNEDAMS SDDELNWGER EVQDAQMRLE DKGLKDMLLS RFGSHIGTLK LEFSKKKKKG  240
KLPKEGRKVL LEWWNVHYKW PYPTEADKMA LAETTGLDPK QINNWFINQR KRHWKPSESM  300
QFASMDDVGE QLYARLDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.11e-116TALE family protein