PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546764.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 295aa MW: 32712.6 Da PI: 8.196

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	125	144	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_023546764.1 125 FSCSVCSKTFNRYNNMQMHM 144 89*****************9 PP
2	zf-C2H2	16.1	3.2e-05	210	232	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk+F + + ++H +++ XP_023546764.1 210 FSCRKCGKPFAVRGDWRTHEKNC 232 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MRSGNLTCIS SSESACLEGD EEGGGGGGGG EDSIFLSLCP PGQRHTVSSK HRQLQNKQNP 60 VTPNSSLQNP NILHHQHAAV TVAMHIGPPA TAAATESNDV SAARPVDGQY WIPTPAQILV 120 GPTQFSCSVC SKTFNRYNNM QMHMWGHGSQ YRKGPESLRG SKPASSMLRL PCYCCAEGCK 180 NNIEHPRSRP LKDFRTLQTH YKRKHGAKPF SCRKCGKPFA VRGDWRTHEK NCGKLWFCIC 240 GSDFKHKRSL KDHVRAFGDG HAPHTVQLCE VEDDDWDDND DHEHVNGSQP WSIYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-119	C2H2 family protein