PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546714.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 352aa    MW: 38475.7 Da    PI: 5.2463
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-20147196255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_023546714.1 147 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 196
                     59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MAALMDLYGC RDFQSDPVGG ELMEALEPFM KAASSSSSFS IPDFSFSSSI QTESTSYSSD  60
CSPPMIHLFS GQDFHGLEQS ASIGLNYLTP FQIQQIQSQF ALQTLIPPVW GQINNQVARN  120
QRNGGSLLAP KGISMKQVGS PLKSTKLYRG VRQRHWGKWV AEIRLPRNRT RLWLGTFDTA  180
EEAALAYDKA AYKLRGDFAR LNFPHLKHHG SSVGGDFGEY KPLHSAVDAK LEAICQTLAE  240
SQKQGKSNRA SSKKSKSSSS STVESECETP TVIDPDENLK TEDARSSGSE ICCKAENSSS  300
PVSAESDESA GSSPLSDLTF PDQTDSPWEP PSESSMLQKY PSEIDWASIF TS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-67ERF family protein