PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546525.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family CO-like
Protein Properties Length: 401aa    MW: 45777.8 Da    PI: 7.9885
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546525.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box261.9e-081760340
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
                    +r C+ +  k+++++C  ++ +lC+ C  + H+       H++v
  XP_023546525.1 17 ARPCESCIIKRARWYCAADDAFLCQACDASVHSAnslarrHERV 60
                    678*****************************657788888876 PP

2CCT68.61.7e-23346389144
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                     Rea+++RY+eKr+tR+FeKkirYe+RK +Ae+RpR+KGrFvk++
  XP_023546525.1 346 REARVSRYREKRRTRLFEKKIRYEVRKLNAEKRPRMKGRFVKRS 389
                     9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MMPRKSVQKT AEGGKTARPC ESCIIKRARW YCAADDAFLC QACDASVHSA NSLARRHERV  60
RLPTVSYRPS SDNSSAASWH QGFTRKPRSP RMGKTAPMRK PFPQVPEVSA KEETEDQEQL  120
LLYRVPELGT DSKVGNLFSF VGEKENSNGY LSYHMDPAEF AADVESLLGK SLNNKCLDME  180
ELGLAASKDH STTKDDYSLN SHELIRIEQD EIEKLTPMLS AEADTMREPF ELNFMDFGRN  240
PTTCGEENKV MMEVKEVVKK GELEMEETKI VNNKKKVSLS LDSEAVIMAW GSRGTPWMSD  300
DGPNLDFNYH WLDYMGTWES EYYYQAFGEV SGGIRRQAAA GVEGEREARV SRYREKRRTR  360
LFEKKIRYEV RKLNAEKRPR MKGRFVKRSS CFAPPPLPLF N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1357373RRTRLFEKKIRYEVRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68520.16e-70CO-like family protein