PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546422.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 348aa    MW: 37439.4 Da    PI: 8.598
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.13.9e-3882142262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     +e+ lkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGa+rnvPvGgg+r++ k+s
  XP_023546422.1  82 PEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRSSKRS 142
                     67889***************************************************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MVFSSVPVFL DPPNWPSQQP NHLQGSGCET NNGQHLPPTA QPAAAGGGGG GGGDRGGGGG  60
VPSSIRPGSM TDRARMAKIP QPEAGLKCPR CESTNTKFCY FNNYSLTQPR HFCKTCRRYW  120
TRGGAMRNVP VGGGCRRSSK RSSKGGSNRS KSPAGSSTST STVSSNSCTT DIISHQLGPP  180
PPTHFPFLAP NLHNLSDFGN IGLNFEGLQI PNSSGGESTI LSSGITDHTQ WKIPFFANLH  240
QQNGMYSNFM AEDHHNHHHH QQQQPADISK PLLDNGFSTT THLLGTTNGS MKLMEDTQGI  300
NNLSRNFLGI QPNDQFWNSI TTTTPGNIAW TDQISDHFNS TSSTTHLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136142RRSSKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.15e-47Dof family protein