PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546400.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 414aa MW: 46428.8 Da PI: 5.0354

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	25.3	4.1e-08	72	151	33	128
NAM 33 vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +++++ y+++P++Lp + wy+ + + g + g+Wk + d +++s +++ +g + + +y+g+ap +kt Wvm+ y XP_023546400.1 72 NVHDINPYQCKPENLP------DGVWYYVEGNVDA---G------SSFGRWKLKDGDCKLYS-NSSFTGGRASYEYYEGQAPYESKTAWVMQKYW 150 5889999999999998......3356655444332...2......34588**********.9999*************************7 PP NAM 128 l 128 + XP_023546400.1 151 M 151 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MTNEETSANR LSSSLIGDLP ALDKIRQEFC LLLVTMTPST VTSSTILDLF STDNETFLAL 60 WRIRSGGSFP ANVHDINPYQ CKPENLPDGV WYYVEGNVDA GSSFGRWKLK DGDCKLYSNS 120 SFTGGRASYE YYEGQAPYES KTAWVMQKYW MNQMDLRATI EQKETSSLCK VFLGDEQFQN 180 NEMIQKTEFS SILNSEPILN HQLVVTDGST SNNMASGSTS KSKMNEDDKM IELADAGKRL 240 DNHLEDIHPE MDYYLGDDYL ELLDLDNPTS SSSSSENSSC LSMSSNEDFD TMDVLRDVER 300 EINHDRGRRD AACIHSSAPF KLKKEVVYQV ASDSLVTIIR SHPPAKETPK TDSSANMKLP 360 SQSKKEGYRM KGASSSCHNK VVSNGEETGV DGGKKRVGRR EKSPKKKYFC FFPL

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MTNEETSANR LSSSLIGDLP ALDKIRQEFC LLLVTMTPST VTSSTILDLF STDNETFLAL  60
WRIRSGGSFP ANVHDINPYQ CKPENLPDGV WYYVEGNVDA GSSFGRWKLK DGDCKLYSNS  120
SFTGGRASYE YYEGQAPYES KTAWVMQKYW MNQMDLRATI EQKETSSLCK VFLGDEQFQN  180
NEMIQKTEFS SILNSEPILN HQLVVTDGST SNNMASGSTS KSKMNEDDKM IELADAGKRL  240
DNHLEDIHPE MDYYLGDDYL ELLDLDNPTS SSSSSENSSC LSMSSNEDFD TMDVLRDVER  300
EINHDRGRRD AACIHSSAPF KLKKEVVYQV ASDSLVTIIR SHPPAKETPK TDSSANMKLP  360
SQSKKEGYRM KGASSSCHNK VVSNGEETGV DGGKKRVGRR EKSPKKKYFC FFPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	3e-10	NAC family protein