PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546307.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 296aa    MW: 32357.9 Da    PI: 7.3396
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.61.5e-17206242135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nCg+++  Tp++Rrgp+g+++LCnaCGl+++ +g+
  XP_023546307.1 206 CTNCGVSSmvTPMMRRGPSGPRSLCNACGLFWANRGT 242
                     *********************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MYGRAEPLTM GDQIASTPDC GDTGEPLDNR LVRYGAHSLE DGAGVGSMIE DLNPDAVYVS  60
AGDGSDMAVQ RSDGSSQLTL SFRGQVYLFD AVSPEKVQAV LLLLGGCELS SGQQSVDLVN  120
QNQRNAIDLP GRSSQPQRAA SLNRFRQKRK ERCFDKKVRY GVRQEVALRM QRNKGQFTSS  180
KKPDGSYSHD SVSESRRDEN PLETSCTNCG VSSMVTPMMR RGPSGPRSLC NACGLFWANR  240
GTLKDLSKRS QDHRVTPAEQ CESDAAKDFD CRRGNHAPNN LVSFPNGDTS TLMAEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.22e-78GATA family protein