PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546231.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 303aa    MW: 32796.8 Da    PI: 9.4926
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.92.2e-3867126261
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                     +e  lkcprC+s ntkfCy+nny+lsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk++
  XP_023546231.1  67 PEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRA 126
                     56789****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MVFPLDPPPN WPSFSNPEQN NTASDSDQVL LPLPPSGGGG GGGGGGGGLI RPVSMTDRAR  60
LAKIPQPEPG LKCPRCESPN TKFCYFNNYN LSQPRHFCKT CRRYWTRGGA LRNVPVGGGC  120
RRNKRAKPPN RSKSPMASER PSSANSTPAV SLSPQPHLPF LSSLHNFSNY LNLGIIPPPP  180
PPTSSGAAAG GPDIHEFHGD HWRLQQPQQF PILANNQQPN LLYTFDPPEG ATTRYNLNEL  240
SRLEMENNVG MTMAGTVKVE ESKAMNLGKN FQFWVGGGDT NAWSTGADLH SFTTSSAGHL  300
SRQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121128RRNKRAKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28810.13e-47Dof family protein