PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546221.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 395aa MW: 43678.8 Da PI: 9.6379

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.1	4e-28	258	308	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQ XP_023546221.1 258 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQ 308 68************************************************* PP
2	Myb_DNA-binding	34.5	4.7e-11	260	308	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++q XP_023546221.1 260 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQ 308 568***************99***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MDCKAERYFM LLKSFVCVEE DHSHSQTQLQ DLLSCLQGER LKIDAFKREL PLCMHLLNNA 60 LESCRQQLQA WRVNSKIHQQ NGEKPVLEEF IPLKQSTSQP SQTLSNISDR ANWMTSAQLW 120 SQTTNDESKP ILSSSKQQQQ QQQPIDHQLG FIQKLHTNSN NRGAFLPFSK DSILSHTHYS 180 TPPQLPDLAL AAAPATGGGN RQEVDGNKCG NSDHHQPENG NMVTGKVNLG GEGEVITSNN 240 ANSNNNTNNS TTQNGHRKAR RCWSPDLHRR FVNALQMLGG SQVATPKQIR ELMKVDGLTN 300 DEVKSHLQAA HETAQSKPTS GRSSCAAAGG LRRHLGSTGL RRAWRSTSPL RTTPNNLLWT 360 AGEPRFLSAA TAPPAHATNV QGRRHCSAPN LATFR

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MDCKAERYFM LLKSFVCVEE DHSHSQTQLQ DLLSCLQGER LKIDAFKREL PLCMHLLNNA  60
LESCRQQLQA WRVNSKIHQQ NGEKPVLEEF IPLKQSTSQP SQTLSNISDR ANWMTSAQLW  120
SQTTNDESKP ILSSSKQQQQ QQQPIDHQLG FIQKLHTNSN NRGAFLPFSK DSILSHTHYS  180
TPPQLPDLAL AAAPATGGGN RQEVDGNKCG NSDHHQPENG NMVTGKVNLG GEGEVITSNN  240
ANSNNNTNNS TTQNGHRKAR RCWSPDLHRR FVNALQMLGG SQVATPKQIR ELMKVDGLTN  300
DEVKSHLQAA HETAQSKPTS GRSSCAAAGG LRRHLGSTGL RRAWRSTSPL RTTPNNLLWT  360
AGEPRFLSAA TAPPAHATNV QGRRHCSAPN LATFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	8e-69	G2-like family protein