PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546220.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 399aa MW: 43382 Da PI: 8.0873

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546220.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.8e-32	205	260	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_023546220.1 205 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 260 68****************************************************97 PP
2	Myb_DNA-binding	40.7	5.6e-13	207	258	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_023546220.1 207 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 258 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MHLLNNALES CRQQLQAWRV NSKIHQQNGE KPVLEEFIPL KQSTSQPSQT LSNISDRANW 60 MTSAQLWSQT TNDESKPILS SSKQQQQQQQ PIDHQLGFIQ KLHTNSNNRG AFLPFSKDSI 120 LSHTHYSTPP QLPDLALAAA PATGGGNRQE VDGNKCGNSD HHQPENGNMV TGKVNLGGEG 180 EVITSNNANS NNNTNNSTTQ NGHRKARRCW SPDLHRRFVN ALQMLGGSQV ATPKQIRELM 240 KVDGLTNDEV KSHLQKYRLH TRRPSPSPQA AGAPAPQLVV LGGIWVPPDY AAHGGAPALY 300 GPHPTTYCGP PVNQDFYPPL PHHQHMLQMY KGAATAQPQI SPHSDEGGNG DRSESIEDGG 360 KSESGSWKVE SGGEGKGKLA ALRQEGGEAS NGSEITLKF

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MHLLNNALES CRQQLQAWRV NSKIHQQNGE KPVLEEFIPL KQSTSQPSQT LSNISDRANW  60
MTSAQLWSQT TNDESKPILS SSKQQQQQQQ PIDHQLGFIQ KLHTNSNNRG AFLPFSKDSI  120
LSHTHYSTPP QLPDLALAAA PATGGGNRQE VDGNKCGNSD HHQPENGNMV TGKVNLGGEG  180
EVITSNNANS NNNTNNSTTQ NGHRKARRCW SPDLHRRFVN ALQMLGGSQV ATPKQIRELM  240
KVDGLTNDEV KSHLQKYRLH TRRPSPSPQA AGAPAPQLVV LGGIWVPPDY AAHGGAPALY  300
GPHPTTYCGP PVNQDFYPPL PHHQHMLQMY KGAATAQPQI SPHSDEGGNG DRSESIEDGG  360
KSESGSWKVE SGGEGKGKLA ALRQEGGEAS NGSEITLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	4e-74	G2-like family protein