PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546219.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 452aa MW: 49611.2 Da PI: 7.4999

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.7e-32	258	313	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_023546219.1 258 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 313 68****************************************************97 PP
2	Myb_DNA-binding	40.4	6.7e-13	260	311	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_023546219.1 260 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 311 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MDCKAERYFM LLKSFVCVEE DHSHSQTQLQ DLLSCLQGER LKIDAFKREL PLCMHLLNNA 60 LESCRQQLQA WRVNSKIHQQ NGEKPVLEEF IPLKQSTSQP SQTLSNISDR ANWMTSAQLW 120 SQTTNDESKP ILSSSKQQQQ QQQPIDHQLG FIQKLHTNSN NRGAFLPFSK DSILSHTHYS 180 TPPQLPDLAL AAAPATGGGN RQEVDGNKCG NSDHHQPENG NMVTGKVNLG GEGEVITSNN 240 ANSNNNTNNS TTQNGHRKAR RCWSPDLHRR FVNALQMLGG SQVATPKQIR ELMKVDGLTN 300 DEVKSHLQKY RLHTRRPSPS PQAAGAPAPQ LVVLGGIWVP PDYAAHGGAP ALYGPHPTTY 360 CGPPVNQDFY PPLPHHQHML QMYKGAATAQ PQISPHSDEG GNGDRSESIE DGGKSESGSW 420 KVESGGEGKG KLAALRQEGG EASNGSEITL KF

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MDCKAERYFM LLKSFVCVEE DHSHSQTQLQ DLLSCLQGER LKIDAFKREL PLCMHLLNNA  60
LESCRQQLQA WRVNSKIHQQ NGEKPVLEEF IPLKQSTSQP SQTLSNISDR ANWMTSAQLW  120
SQTTNDESKP ILSSSKQQQQ QQQPIDHQLG FIQKLHTNSN NRGAFLPFSK DSILSHTHYS  180
TPPQLPDLAL AAAPATGGGN RQEVDGNKCG NSDHHQPENG NMVTGKVNLG GEGEVITSNN  240
ANSNNNTNNS TTQNGHRKAR RCWSPDLHRR FVNALQMLGG SQVATPKQIR ELMKVDGLTN  300
DEVKSHLQKY RLHTRRPSPS PQAAGAPAPQ LVVLGGIWVP PDYAAHGGAP ALYGPHPTTY  360
CGPPVNQDFY PPLPHHQHML QMYKGAATAQ PQISPHSDEG GNGDRSESIE DGGKSESGSW  420
KVESGGEGKG KLAALRQEGG EASNGSEITL KF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-95	G2-like family protein