PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023546118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HB-other | ||||||||
Protein Properties | Length: 1042aa MW: 117768 Da PI: 6.7069 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 39.3 | 1.1e-12 | 6 | 55 | 7 | 56 |
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 t++ql++L +++ +++yp++++ + A+ lgLt rqV+ WF +R +++ XP_023546118.1 6 KTPQQLQALDAFYSEEKYPTQSRLKTYAATLGLTYRQVQGWFAQKRRRDR 55 699*******************************************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1042 aa Download sequence |
MEFRRKTPQQ LQALDAFYSE EKYPTQSRLK TYAATLGLTY RQVQGWFAQK RRRDRSEDET 60 TVSSTGEWLQ ENQRETKVRK VSKQTSSVHV DCCGKMAAPI KTHGIGKGLM TVWQATNPDA 120 GKFPAGINFS GRELMDASSV STSSSEESLR QGKRPPRQAK VKGRQASKVQ GKRKPSTKNR 180 RVERNGEKSQ KQFCYEKCEL AWERKKSQGC IDQFATLVDD EELELRELQA GKHIMASCDH 240 FMANDVNSCS LCKDMLAKFP PNSVKMKQPF GIQSWDSSLD IGKKLFKAFN FLYTYAITLG 300 ICPFTLDEFA QAFYDKNSFL LGKIHMALLK LLFCDIEAEF SNAYLTPLSK SCKFLALVHS 360 LGSRDFALDI WKKSLNPLTW TEILRQVFVA AGFCSKQGAL QKETLSKEMN LMVKYGLQRG 420 TLKGELFIIL SEQGNNGIKV SDLTRESKIV DLNVAGTTEE LELQICSTLS SDITLFEKIS 480 SSAYRVRPSP ATMDVDEIQS DTDFGSVDDI VANASICSSS YDSECDSENL CSQRTKIQKS 540 NNENPTVFME IDVSHPGEAW LLGLMEDEYS GLSIEEKLNA LVALIDLLSY GSSIKPKGTS 600 TSCAIDYASD IRRYGSGAKI KKSSVRGHNL SGSFLTSSGQ LHGANIRYVS LEHHPIDSTT 660 TISEFHENSV CQGNGANKMG DSIYLHPMQS IFLGSDRRYN RYWLFLGPCN ASDPGHRRVY 720 FESSEDGHWE VIDTEEALWA LLSVLDDRGK REAYLIESLE KRVAFLCEAM SNYSTTNLVS 780 RSFTQSEQSD MDRIRESSYS PVSDVDNSLN QAETTGDMLP SCSAIVLDVK RKGEEEKQSW 840 NCLQEFDSWV WNFFYHALYA VRHGKRSYLD SLARCESCHD LYWRDEKHCK VCHMTFELDF 900 NLEERYTIHR ATCREKEDDD VFPKHKVLSS QFQSLKAAVH AIESVMPEGA MVGAWTKSAH 960 KLWIKRLRRT SSLTELLQVV ADFVGAMNED WFYNFPEGSS VDFRDTLASF ASLPQTTSAL 1020 AFWLVKLDAF LNCFLWKDLK GS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12750.1 | 2e-94 | HB-other family protein |