PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Previous version: v3.0 v4.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546081.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 300aa MW: 33089.5 Da PI: 7.1593

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101	7e-32	141	198	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk s+fprsYYrCt ++C+vkk+vers+edp+vv++tYeg+H h+ XP_023546081.1 141 EDGYRWRKYGQKAVKYSPFPRSYYRCTNSKCTVKKRVERSSEDPSVVITTYEGQHCHH 198 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MDPSHNPDSP PSFSTADSST VWTNALPSAD SFYFFPADRD SAVLTEFGWN FLSHDAQPTR 60 FLDDKPDLPG TSALAVDETG GLQSPDAPVP VASNPSMSSS SSGEPPEKLP EIPQKVKKKG 120 QKRIRQPRFA FMTKSEVDHL EDGYRWRKYG QKAVKYSPFP RSYYRCTNSK CTVKKRVERS 180 SEDPSVVITT YEGQHCHHTV GFPRGGLNMA HKAAFGSQFS PQGAHIYYHE TQPLPRNNNN 240 NNDTPTARDH HSQHLSTAAA SSSSNALSLE QQEPTNSQPQ VASDEGLLGD IVPPGMMRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	3e-63	WRKY family protein