PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023546045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | Whirly | ||||||||
Protein Properties | Length: 272aa MW: 30372.5 Da PI: 9.5734 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 207.7 | 1.3e-64 | 94 | 231 | 1 | 138 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 s+yk+kaal+v+++ p+f+ ldsg++k++r+G++ll++a+a+++r+ydW++kq+f+ls+te+++lv l+++esce+fhdp +++s+eGkvrk lk XP_023546045.1 94 SIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDEGKVRKILK 188 7********************************************************************************************** PP Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138 vePlpdGsG f+nlsv+n+l++++es+++P++kae++vl +++ XP_023546045.1 189 VEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAF 231 ***************************************9988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 272 aa Download sequence |
MLRLQCLSSS LLPPLIPELS PETSSNRRLC RLNSFRPLLT LSTTPKSSPK CQYSWNTQQH 60 QAAFESGSQT DSFSSQTRAG AAAALPPRFF VGHSIYKGKA ALTVEPRPPE FTPLDSGAFK 120 ISREGFVLLQ FAPAAGVRQY DWSRKQVFSL SVTELGSLVA LGPRESCELF HDPYKGKSDE 180 GKVRKILKVE PLPDGSGRFF NLSVQNKLTN VDESIYIPIT KAEYTVLVEA FKFILPHLMG 240 WHAIANSMTR TEDNRRANDA NPRYGGDFEW SR |