PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546027.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 613aa    MW: 66970.6 Da    PI: 4.9917
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS450.31.3e-1372396051374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAeav++++++ a+al++++  la +++ +m+++a+yf+eALa+r++r    +y+      +s    ++ l++   f+e++P+lkf+h
  XP_023546027.1 239 LVHTLMACAEAVQQENMKIAEALVKHIGLLAVSQAGAMRKVATYFAEALARRIYR----IYSPQDGFYSS---YADILQM--HFYETCPYLKFAH 324
                     689****************************************************....77544333333...4444333..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +taNqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p++g  +++l+++g++La++Ae++gv+fefn +v+++l++l
  XP_023546027.1 325 FTANQAILEAFASASRVHVIDFSLNQGMQWPALMQALALRPGGPPTFRLTGIGPPKQGnTADSLQQVGWKLAQMAEAIGVEFEFNQIVCSNLANL 419
                     ********************************************************99999********************************** PP

            GRAS 190 eleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres..e 280
                     ++ +L+++p   Ea+aVn+v+ lhrll++++++e+    vL  +k ++Pk+v++veqea+hn+  F++rf+eal+yys +fdsle++    +  +
  XP_023546027.1 420 NPAALEIRPpaVEAVAVNSVFDLHRLLARPGAIEK----VLGSIKATKPKIVTIVEQEANHNGRVFMDRFTEALHYYSNMFDSLEVSSTGFEpaS 510
                     *********999***********************....*********************************************87754333459 PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     e++ +++++lgr+i+nvvaceg +r+erhe+l +Wr r+e+aGF+pv+l+++a kqa++ll+ ++ ++gyrvee++g+l+lgW+++pL+++SaW+
  XP_023546027.1 511 EDVLLSEVYLGRQICNVVACEGPDRVERHESLTHWRTRMESAGFNPVHLGSNAFKQASMLLALFAgGEGYRVEENNGCLMLGWHTQPLIATSAWQ 605
                     9*********************************************************************************************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 613 aa     Download sequence    
MKMKMKRELE DDRSTGGGVY GGGRQGVGKG ECSSVLSGKV KMWEEEEEQE VGGGGMDELL  60
AVLGYKVRAS DMADVAQKME QLEMVMGSVK EDGISHLASD TVHYNPSDLS AWIQNMLSEF  120
NNTPNHFNSS SISTPPPQSS QYSNPHSRIQ SRPSRLYDDD SEYDLSAIPG VAVFPSKDSS  180
TEIETNSRKR VKIEGESSVN LLPPSPPFVA AAAAAGIVSE PSRPVVVVEE GSQDAGIQLV  240
HTLMACAEAV QQENMKIAEA LVKHIGLLAV SQAGAMRKVA TYFAEALARR IYRIYSPQDG  300
FYSSYADILQ MHFYETCPYL KFAHFTANQA ILEAFASASR VHVIDFSLNQ GMQWPALMQA  360
LALRPGGPPT FRLTGIGPPK QGNTADSLQQ VGWKLAQMAE AIGVEFEFNQ IVCSNLANLN  420
PAALEIRPPA VEAVAVNSVF DLHRLLARPG AIEKVLGSIK ATKPKIVTIV EQEANHNGRV  480
FMDRFTEALH YYSNMFDSLE VSSTGFEPAS EDVLLSEVYL GRQICNVVAC EGPDRVERHE  540
SLTHWRTRME SAGFNPVHLG SNAFKQASML LALFAGGEGY RVEENNGCLM LGWHTQPLIA  600
TSAWQLDADE STQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein