PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023545965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Trihelix | ||||||||
Protein Properties | Length: 383aa MW: 44088.5 Da PI: 6.2075 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 88 | 1.1e-27 | 69 | 150 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem+ ++++k++k+lWe++s+kmrergf rsp++C++kw+nl k++kk k+++++ s +++y++++e XP_023545965.1 69 WVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMRERGFDRSPTMCTDKWRNLLKEFKKAKHQDRGS---GSAKMSYYKEIE 150 ********************************************************************84...556899***997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence |
MYLSDKPRPI DIYKEEASRD MMIEVASNAD HHIQPHQPQP THQQHQMMLG DSSGEDHEVK 60 APKKRAETWV QDETRSLIAL RREMDGLFNT SKSNKHLWEQ ISAKMRERGF DRSPTMCTDK 120 WRNLLKEFKK AKHQDRGSGS AKMSYYKEIE EILKERSKST QYKSPTPPKI DSYIQFSDKG 180 IEDNGLTFGP VEGGRPSLNL ERQLDHDGHP LAITAADAVA ATGIPPWNWR EAPGNDGESQ 240 AFGGRVISVK WGDYTRRIGI DGTSEAIKEA IKSAFRLRTK RAFWLEDEDQ VVRSLDRDMP 300 LGNYTLHLDE VELLISGLAV KICLYDESDH LPVHTEEKIF YIEEDYRDFL TRRGWTCLRE 360 FDGYRNIDTM DDLRPGAIYR GIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13450.1 | 0.0 | Trihelix family protein |