PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545907.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 368aa    MW: 41821 Da    PI: 4.7955
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.91.8e-34451372103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k++e++ed+ +++++sws+  nsf+v+d ++f++++Lp+yFkhsnf+SFvRQLn+YgF+kv+ ++         weF+++ F  g+++ll++
  XP_023545907.1  45 FLTKTFEMVEDPLTDSIVSWSKARNSFIVWDYHKFSSSLLPRYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLGGQRHLLRT 130
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     ikr++++
  XP_023545907.1 131 IKRRRHS 137
                     ***9875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MDEMKVKPEK SVAVGTAVCS SSSSSGSSVT PQPIEGIHDV GPPPFLTKTF EMVEDPLTDS  60
IVSWSKARNS FIVWDYHKFS SSLLPRYFKH SNFSSFVRQL NTYGFRKVDP DRWEFANEGF  120
LGGQRHLLRT IKRRRHSTQS FQHHQGGICV ELGEFGLEGE LERLKRDRSS LMAELVRLRQ  180
QHQSSREQII AMEDRLEKSE NKQKQIMTFL SKALKNPSFV QKFIHSNQGR ELRGVEIGRK  240
RRLTSSPSVE NLQEESVPVA VKEEEPDMET LLAVNFEGES NGEITDPVSD GIPMAAMDVG  300
LSAHEELGFF SELWAEDPWA GYPEEEPIMV GNQSDIDVEV EDLIAEPPDW PENLQDLVDQ  360
MEFLRPKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-111HSF family protein