PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545868.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

HSF

Protein Properties

Length: 376aa MW: 41955 Da PI: 7.9978

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.3	8e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F+kg+k+ll++ XP_023545868.1 25 FLSKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFRKGEKHLLCE 110 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ XP_023545868.1 111 IHRRKTA 117 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MSLMLDNCEG ILLSLDSHKS VPAPFLSKTY QLVDDPSTDH IVSWGEDDTT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF RKGEKHLLCE IHRRKTAQPQ 120 LPYNHHHLGS LSGSSFFPFS TRVSISPSDS DEHINWCDSP PLPPRAAPAG FSVLGSANVS 180 NNSNTSYSMM SSVTALSEDN ERLRRNNSML ISELAHMRKL YNDIIYFVQN HVKPVSPSNS 240 FPSLLLSHPS TTTTPPPNSQ KPLNQLLGFY PPTHANTTTK HFSFPTANAI PTTHFVSSPT 300 ATSKSAVTEL DTFGMEGDNS SCKTKLFGVP LSSSKKRQHP DTTNYVSTSD TNKNSRLVLE 360 KGDNLGLNLM PPSSSC

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MSLMLDNCEG ILLSLDSHKS VPAPFLSKTY QLVDDPSTDH IVSWGEDDTT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF RKGEKHLLCE IHRRKTAQPQ  120
LPYNHHHLGS LSGSSFFPFS TRVSISPSDS DEHINWCDSP PLPPRAAPAG FSVLGSANVS  180
NNSNTSYSMM SSVTALSEDN ERLRRNNSML ISELAHMRKL YNDIIYFVQN HVKPVSPSNS  240
FPSLLLSHPS TTTTPPPNSQ KPLNQLLGFY PPTHANTTTK HFSFPTANAI PTTHFVSSPT  300
ATSKSAVTEL DTFGMEGDNS SCKTKLFGVP LSSSKKRQHP DTTNYVSTSD TNKNSRLVLE  360
KGDNLGLNLM PPSSSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-101	HSF family protein